Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc metalloprotease htpx | DC415_19415 | Not Available | Negative | 4109755 - 4110714 | 34552.9 |
| duf1674 domain-containing protein | DC415_19420 | Not Available | Positive | 4110832 - 4111032 | 7227.28 |
| parb/repb/spo0j family partition protein | DC415_19425 | Not Available | Negative | 4111456 - 4112337 | 32371.5 |
| para family protein | DC415_19430 | Not Available | Negative | 4112373 - 4113164 | 28475.5 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | DC415_19435 | Not Available | Negative | 4113189 - 4113806 | 22803.1 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis enzyme mnmg | DC415_19440 | Not Available | Negative | 4113818 - 4115695 | 67960.6 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | DC415_19445 | Not Available | Negative | 4115746 - 4117071 | 47834.9 |
| transcription termination factor rho | DC415_19450 | Not Available | Negative | 4117337 - 4118602 | 46937.9 |
| protoporphyrinogen oxidase hemj | DC415_19455 | Not Available | Negative | 4118787 - 4119332 | 20394.6 |
| uroporphyrinogen decarboxylase | DC415_19460 | Not Available | Negative | 4119329 - 4120363 | 37631.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


