Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal 4-dehydrogenase | DC415_19365 | Not Available | Negative | 4097265 - 4098278 | 37354.3 |
| laci family transcriptional regulator | DC415_19370 | Not Available | Negative | 4098404 - 4099345 | 33174.0 |
| abc transporter permease | DC415_19375 | Not Available | Negative | 4099445 - 4100467 | 34995.9 |
| d-xylose abc transporter atp-binding protein | DC415_19380 | Not Available | Negative | 4100476 - 4102020 | 56736.4 |
| fadr family transcriptional regulator | DC415_19385 | Not Available | Positive | 4102300 - 4102992 | 25588.4 |
| galactonate dehydratase | DC415_19390 | Not Available | Positive | 4103038 - 4104570 | 54960.5 |
| bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase | DC415_19395 | Not Available | Negative | 4104649 - 4106265 | 57128.3 |
| heparinase | DC415_19400 | Not Available | Negative | 4106400 - 4108010 | 59608.6 |
| hypothetical protein | DC415_19405 | Not Available | Negative | 4108170 - 4108361 | 7127.62 |
| mfs transporter | DC415_19410 | Not Available | Negative | 4108373 - 4109650 | 46195.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


