Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobaltochelatase subunit cobn | DC415_19315 | Not Available | Negative | 4084682 - 4088041 | 120942.0 |
| cobalamin biosynthesis protein cobw | DC415_19320 | Not Available | Negative | 4088048 - 4089085 | 37316.6 |
| metal-binding protein | DC415_19325 | Not Available | Negative | 4089079 - 4089504 | 14909.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | DC415_19330 | Not Available | Positive | 4089957 - 4090574 | 22747.5 |
| cobyric acid synthase cobq | DC415_19335 | Not Available | Positive | 4090578 - 4092035 | 51205.6 |
| cobalamin biosynthesis protein cobd | DC415_19340 | Not Available | Negative | 4092022 - 4092987 | 34020.6 |
| threonine-phosphate decarboxylase | DC415_19345 | Not Available | Positive | 4092986 - 4094014 | 36169.4 |
| fuconate dehydratase | DC415_19350 | Not Available | Negative | 4094094 - 4095371 | 47453.1 |
| dehydrogenase | DC415_19355 | Not Available | Negative | 4095425 - 4096435 | 36092.7 |
| amidohydrolase | DC415_19360 | Not Available | Negative | 4096439 - 4097260 | 30475.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


