Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoacyl-acp reductase | DC415_19115 | Not Available | Negative | 4029627 - 4030352 | 25806.8 |
| acetyl-coa c-acetyltransferase | DC415_19120 | Not Available | Negative | 4030424 - 4031605 | 40437.4 |
| polyhydroxyalkanoate synthesis repressor phar | DC415_19125 | Not Available | Positive | 4031849 - 4032427 | 22013.4 |
| cytosine deaminase | DC415_19130 | Not Available | Negative | 4032452 - 4033804 | 47968.3 |
| lysr family transcriptional regulator | DC415_19135 | Not Available | Negative | 4033888 - 4034871 | 35511.3 |
| isopenicillin n synthase family oxygenase | DC415_19140 | Not Available | Negative | 4034868 - 4035857 | 37433.4 |
| abc transporter permease | DC415_19145 | Not Available | Negative | 4035948 - 4036748 | 28792.5 |
| abc transporter atp-binding protein | DC415_19150 | Not Available | Negative | 4036750 - 4037523 | 28166.5 |
| hypothetical protein | DC415_19155 | Not Available | Negative | 4037528 - 4038517 | 34645.6 |
| mfs transporter | DC415_19160 | Not Available | Negative | 4039164 - 4040579 | 50757.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


