Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ggdef domain-containing protein | DC415_18715 | Not Available | Negative | 3946046 - 3947233 | 42612.1 |
| hypothetical protein | DC415_18720 | Not Available | Negative | 3947327 - 3947923 | 22372.6 |
| septation protein a | DC415_18725 | Not Available | Negative | 3947920 - 3948570 | 24476.7 |
| signal recognition particle-docking protein ftsy | DC415_18730 | Not Available | Negative | 3948573 - 3950045 | 51683.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | DC415_18735 | Not Available | Negative | 3950068 - 3951342 | 46623.2 |
| diaminopimelate epimerase | DC415_18740 | Not Available | Negative | 3951339 - 3952271 | 33747.1 |
| 3-isopropylmalate dehydratase large subunit | DC415_18745 | Not Available | Negative | 3952597 - 3954006 | 50889.6 |
| hypothetical protein | DC415_18750 | Not Available | Negative | 3954072 - 3954194 | 4396.41 |
| mfs transporter | DC415_18755 | Not Available | Positive | 3954452 - 3955744 | 46872.1 |
| amino acid abc transporter | DC415_18760 | Not Available | Negative | 3955750 - 3956565 | 30078.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


