Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| antibiotic biosynthesis monooxygenase | DC415_01545 | Not Available | Negative | 314942 - 315289 | 13257.5 |
| hemin abc transporter substrate-binding protein | DC415_01550 | Not Available | Positive | 315474 - 316361 | 30361.8 |
| iron abc transporter | DC415_01555 | Not Available | Positive | 316358 - 317446 | 36553.2 |
| heme abc transporter atp-binding protein | DC415_01560 | Not Available | Positive | 317443 - 318225 | 27574.3 |
| duf454 domain-containing protein | DC415_01565 | Not Available | Negative | 318235 - 318600 | 13351.1 |
| lactoylglutathione lyase | DC415_01570 | Not Available | Positive | 318857 - 319252 | 14955.8 |
| uracil-dna glycosylase | DC415_01575 | Not Available | Positive | 319276 - 319968 | 25651.7 |
| hypothetical protein | DC415_01580 | Not Available | Negative | 320069 - 320479 | 14740.7 |
| dioxygenase | DC415_01585 | Not Available | Positive | 320803 - 321747 | 34438.4 |
| esterase | DC415_01590 | Not Available | Positive | 321808 - 322419 | 22301.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


