Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_18615 | Not Available | Negative | 3926337 - 3927218 | 30252.0 |
| abc transporter permease | DC415_18620 | Not Available | Negative | 3927426 - 3928379 | 32364.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | DC415_18625 | Not Available | Negative | 3929122 - 3930294 | 43610.8 |
| hypothetical protein | DC415_18630 | Not Available | Negative | 3930564 - 3931067 | 17761.2 |
| duf1232 domain-containing protein | DC415_18635 | Not Available | Negative | 3931427 - 3931804 | 13862.0 |
| 4a-hydroxytetrahydrobiopterin dehydratase | DC415_18640 | Not Available | Negative | 3931857 - 3932162 | 11129.2 |
| rna 2',3'-cyclic phosphodiesterase | DC415_18645 | Not Available | Negative | 3932310 - 3932903 | 21918.3 |
| arylesterase | DC415_18650 | Not Available | Negative | 3932972 - 3933622 | 23088.8 |
| abc transporter atp-binding protein | DC415_18655 | Not Available | Positive | 3933690 - 3934403 | 24655.6 |
| glycosyl transferase family 1 | DC415_18660 | Not Available | Positive | 3934400 - 3936949 | 90271.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


