Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic diphosphatase | DC415_18565 | Not Available | Negative | 3914693 - 3915226 | 19850.1 |
| n-acetyltransferase | DC415_18570 | Not Available | Negative | 3915469 - 3915975 | 19000.7 |
| translational gtpase typa | DC415_18575 | Not Available | Negative | 3916188 - 3918008 | 66596.3 |
| peptidase m3 | DC415_18580 | Not Available | Negative | 3918278 - 3920344 | 76565.6 |
| marr family transcriptional regulator | DC415_18585 | Not Available | Positive | 3920586 - 3921053 | 17045.5 |
| argininosuccinate synthase | DC415_18590 | Not Available | Negative | 3921117 - 3922340 | 45167.2 |
| short-chain dehydrogenase | DC415_18595 | Not Available | Positive | 3922599 - 3923453 | 30345.1 |
| lyse family translocator | DC415_18600 | Not Available | Positive | 3923532 - 3924179 | 23225.2 |
| duf3829 domain-containing protein | DC415_18605 | Not Available | Negative | 3924422 - 3925546 | 40568.6 |
| abc transporter atp-binding protein | DC415_18610 | Not Available | Negative | 3925546 - 3926340 | 28037.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


