Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eve domain-containing protein | DC415_18515 | Not Available | Negative | 3905253 - 3905696 | 16572.6 |
| hypothetical protein | DC415_18520 | Not Available | Negative | 3905711 - 3906004 | 10461.5 |
| glycerol-3-phosphate dehydrogenase | DC415_18525 | Not Available | Negative | 3906030 - 3907019 | 33698.6 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex transferase subunit tsad | DC415_18530 | Not Available | Negative | 3907016 - 3908113 | 38472.5 |
| hydroxymethylbilane synthase | DC415_18535 | Not Available | Positive | 3908186 - 3909115 | 33597.4 |
| uroporphyrinogen iii synthase | DC415_18540 | Not Available | Positive | 3909119 - 3909877 | 26879.4 |
| hypothetical protein | DC415_18545 | Not Available | Positive | 3910011 - 3911495 | 50549.3 |
| heme biosynthesis protein hemy | DC415_18550 | Not Available | Positive | 3911499 - 3913286 | 64826.9 |
| hypothetical protein | DC415_18555 | Not Available | Positive | 3913314 - 3913805 | 18719.9 |
| hypothetical protein | DC415_18560 | Not Available | Positive | 3914154 - 3914690 | 19626.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


