Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| adp-forming succinate--coa ligase subunit beta | DC415_18465 | Not Available | Negative | 3896150 - 3897343 | 41786.5 |
| malate dehydrogenase | DC415_18470 | Not Available | Negative | 3897376 - 3898338 | 33564.9 |
| cell division protein zape | DC415_18475 | Not Available | Negative | 3898517 - 3899680 | 43174.3 |
| hypothetical protein | DC415_18480 | Not Available | Negative | 3899745 - 3900278 | 18152.2 |
| succinate dehydrogenase iron-sulfur subunit | DC415_18485 | Not Available | Negative | 3900483 - 3901262 | 29591.7 |
| succinate dehydrogenase flavoprotein subunit | DC415_18490 | Not Available | Negative | 3901280 - 3903121 | 66785.1 |
| succinate dehydrogenase, hydrophobic membrane anchor protein | DC415_18495 | Not Available | Negative | 3903128 - 3903508 | 13578.3 |
| succinate dehydrogenase, cytochrome b556 subunit | DC415_18500 | Not Available | Negative | 3903521 - 3903913 | 14431.0 |
| hypothetical protein | DC415_18505 | Not Available | Positive | 3904206 - 3904583 | 13805.2 |
| nicotinamide n-methylase | DC415_18510 | Not Available | Negative | 3904600 - 3905244 | 22996.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


