Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | DC415_18215 | Not Available | Negative | 3834307 - 3835488 | 42538.8 |
| ectoine/hydroxyectoine abc transporter atp-binding protein ehua | DC415_18220 | Not Available | Negative | 3835560 - 3836339 | 28351.7 |
| amino acid abc transporter permease | DC415_18225 | Not Available | Negative | 3836336 - 3837259 | 33600.4 |
| amino acid abc transporter | DC415_18230 | Not Available | Negative | 3837256 - 3838146 | 31419.7 |
| nitrate abc transporter substrate-binding protein | DC415_18235 | Not Available | Negative | 3838205 - 3839167 | 36113.3 |
| plp-dependent aminotransferase family protein | DC415_18240 | Not Available | Positive | 3839269 - 3840594 | 47511.4 |
| hypothetical protein | DC415_18245 | Not Available | Negative | 3840607 - 3841089 | 17457.0 |
| nucleotide sugar dehydrogenase | DC415_18250 | Not Available | Negative | 3841106 - 3842506 | 50790.1 |
| glycosyl transferase | DC415_18255 | Not Available | Positive | 3842575 - 3843672 | 40278.1 |
| polysaccharide deacetylase | DC415_18260 | Not Available | Positive | 3843669 - 3844418 | 27719.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


