Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | DC415_18165 | Not Available | Negative | 3819752 - 3821575 | 67235.2 |
| acyl carrier protein | DC415_18170 | Not Available | Positive | 3821991 - 3822242 | 8827.51 |
| acyl-coa dehydrogenase | DC415_18175 | Not Available | Positive | 3822242 - 3823423 | 42235.9 |
| amino acid--[acyl-carrier-protein] ligase | DC415_18180 | Not Available | Positive | 3823428 - 3824339 | 33655.1 |
| duf1839 domain-containing protein | DC415_18185 | Not Available | Positive | 3824356 - 3825342 | 37128.0 |
| beta-mannosidase | DC415_18190 | Not Available | Positive | 3825339 - 3827804 | 90588.6 |
| hypothetical protein | DC415_18195 | Not Available | Positive | 3827981 - 3830698 | 101974.0 |
| cyclic nucleotide-binding domain-containing protein | DC415_18200 | Not Available | Positive | 3830742 - 3831197 | 16690.4 |
| mbl fold metallo-hydrolase | DC415_18205 | Not Available | Positive | 3831368 - 3832228 | 32045.8 |
| adenylate/guanylate cyclase domain-containing protein | DC415_18210 | Not Available | Positive | 3832474 - 3834180 | 63025.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


