Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_01495 | Not Available | Negative | 305599 - 305859 | 9320.23 |
| tripartite tricarboxylate transporter permease | DC415_01500 | Not Available | Negative | 305989 - 307506 | 52636.6 |
| tripartite tricarboxylate transporter tctb family protein | DC415_01505 | Not Available | Negative | 307598 - 308092 | 17708.0 |
| c4-dicarboxylate abc transporter substrate-binding protein | DC415_01510 | Not Available | Negative | 308089 - 309033 | 32176.5 |
| iron abc transporter | DC415_01515 | Not Available | Negative | 309442 - 310521 | 39593.5 |
| dna-binding response regulator | DC415_01520 | Not Available | Positive | 310633 - 311313 | 24572.6 |
| sensor histidine kinase | DC415_01525 | Not Available | Positive | 311310 - 312683 | 48980.4 |
| hypothetical protein | DC415_01530 | Not Available | Negative | 312739 - 313098 | 12205.8 |
| formyltetrahydrofolate deformylase | DC415_01535 | Not Available | Negative | 313303 - 314187 | 32839.4 |
| heme utilization cystosolic carrier protein hutx | DC415_01540 | Not Available | Negative | 314406 - 314939 | 19223.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


