Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DC415_17945 | Not Available | Positive | 3782676 - 3783278 | 21990.2 |
| tetr family transcriptional regulator | DC415_17950 | Not Available | Positive | 3783452 - 3784072 | 22570.5 |
| hypothetical protein | DC415_17955 | Not Available | Positive | 3784450 - 3784776 | 12323.3 |
| holliday junction resolvase ruvx | DC415_17960 | Not Available | Negative | 3784719 - 3785207 | 17472.4 |
| phna protein | DC415_17965 | Not Available | Negative | 3785221 - 3785523 | 10773.6 |
| metal-dependent hydrolase | DC415_17970 | Not Available | Positive | 3785604 - 3786308 | 24729.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatc | DC415_17975 | Not Available | Positive | 3786434 - 3786721 | 10206.3 |
| asp-trna(asn)/glu-trna(gln) amidotransferase gatcab subunit a | DC415_17980 | Not Available | Positive | 3786779 - 3788260 | 52836.8 |
| gnat family n-acetyltransferase | DC415_17985 | Not Available | Positive | 3788281 - 3788742 | 17208.3 |
| polyketide cyclase | DC415_17990 | Not Available | Positive | 3788807 - 3789277 | 17438.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


