Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | DC415_17895 | Not Available | Negative | 3769158 - 3770330 | 41075.1 |
| hydrolase | DC415_17900 | Not Available | Negative | 3770340 - 3770972 | 23622.4 |
| hypothetical protein | DC415_17905 | Not Available | Negative | 3771024 - 3771458 | 15940.7 |
| ribonuclease r | DC415_17910 | Not Available | Negative | 3771532 - 3773886 | 86216.9 |
| type i dna topoisomerase | DC415_17915 | Not Available | Negative | 3773883 - 3776573 | 98169.0 |
| dna-protecting protein dpra | DC415_17920 | Not Available | Negative | 3776817 - 3777971 | 40764.9 |
| glycerol-3-phosphate acyltransferase | DC415_17925 | Not Available | Negative | 3778003 - 3778611 | 21266.8 |
| dihydroorotase | DC415_17930 | Not Available | Negative | 3778664 - 3779956 | 45886.1 |
| aspartate carbamoyltransferase catalytic subunit | DC415_17935 | Not Available | Negative | 3779953 - 3780894 | 33953.6 |
| acyl-coa dehydrogenase | DC415_17940 | Not Available | Positive | 3781024 - 3782676 | 60364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


