Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit j | DC415_17795 | Not Available | Positive | 3745208 - 3745822 | 21842.6 |
| nadh-quinone oxidoreductase subunit nuok | DC415_17800 | Not Available | Positive | 3745852 - 3746160 | 11130.2 |
| nadh-quinone oxidoreductase subunit l | DC415_17805 | Not Available | Positive | 3746168 - 3748165 | 73307.7 |
| nadh-quinone oxidoreductase subunit m | DC415_17810 | Not Available | Positive | 3748165 - 3749676 | 55578.3 |
| nadh-quinone oxidoreductase subunit nuon | DC415_17815 | Not Available | Positive | 3749695 - 3751137 | 50733.6 |
| biotin--[acetyl-coa-carboxylase] ligase | DC415_17820 | Not Available | Positive | 3751164 - 3751904 | 26545.8 |
| ribonuclease j | DC415_17825 | Not Available | Positive | 3752100 - 3753767 | 60476.6 |
| methylmalonyl-coa epimerase | DC415_17830 | Not Available | Positive | 3753871 - 3754275 | 14255.2 |
| duf1467 domain-containing protein | DC415_17835 | Not Available | Positive | 3754507 - 3754776 | 9921.31 |
| proline--trna ligase | DC415_17840 | Not Available | Positive | 3755375 - 3756697 | 49458.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


