Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | DC415_17695 | Not Available | Positive | 3726689 - 3727321 | 23226.1 |
| atp-dependent clp protease atp-binding subunit clpx | DC415_17700 | Not Available | Positive | 3727681 - 3728958 | 46885.5 |
| endopeptidase la | DC415_17705 | Not Available | Positive | 3729372 - 3731789 | 88850.7 |
| hu family dna-binding protein | DC415_17710 | Not Available | Positive | 3731991 - 3732266 | 9471.14 |
| eama family transporter | DC415_17715 | Not Available | Positive | 3732682 - 3733584 | 32252.3 |
| Trna-val | Not Available | Not Available | Positive | 3734316 - 3734391 | Not Available |
| hypothetical protein | DC415_17725 | Not Available | Positive | 3734400 - 3734618 | 8124.9 |
| Trna-asp | Not Available | Not Available | Positive | 3735044 - 3735120 | Not Available |
| Trna-asp | Not Available | Not Available | Positive | 3735164 - 3735240 | Not Available |
| nadh-quinone oxidoreductase subunit a | DC415_17740 | Not Available | Positive | 3735662 - 3736027 | 13770.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


