Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_01445 | Not Available | Positive | 298210 - 299397 | 44908.2 |
| trna 2-thiouridine(34) synthase mnma | DC415_01450 | Not Available | Positive | 299587 - 300783 | 43027.2 |
| Trna-met | Not Available | Not Available | Positive | 300918 - 300994 | Not Available |
| hypothetical protein | DC415_01460 | Not Available | Positive | 301126 - 301380 | 9344.56 |
| hypothetical protein | DC415_01465 | Not Available | Positive | 301380 - 302396 | 37556.9 |
| porin family protein | DC415_01470 | Not Available | Negative | 302647 - 303300 | 23172.9 |
| pas domain s-box protein | DC415_01475 | Not Available | Positive | 303730 - 304152 | 15821.9 |
| csbd family protein | DC415_01480 | Not Available | Negative | 304222 - 304425 | 7997.27 |
| hypothetical protein | DC415_01485 | Not Available | Positive | 304604 - 304825 | 8164.77 |
| dna starvation/stationary phase protection protein dps | DC415_01490 | Not Available | Negative | 304877 - 305392 | 18939.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


