Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar abc transporter substrate-binding protein | DC415_17595 | Not Available | Negative | 3706996 - 3707568 | 20520.7 |
| hypothetical protein | DC415_17600 | Not Available | Positive | 3707788 - 3708414 | 21386.6 |
| duf2842 domain-containing protein | DC415_17605 | Not Available | Negative | 3708475 - 3708687 | 7864.09 |
| heme a synthase | DC415_17610 | Not Available | Positive | 3708861 - 3709979 | 42171.1 |
| streptomycin resistance protein | DC415_17615 | Not Available | Negative | 3709969 - 3710847 | 32199.4 |
| n-acetyl-gamma-glutamyl-phosphate reductase | DC415_17620 | Not Available | Negative | 3710844 - 3711770 | 33359.0 |
| agmatinase | DC415_17625 | Not Available | Negative | 3711842 - 3712795 | 34453.8 |
| acyltransferase | DC415_17630 | Not Available | Positive | 3713058 - 3715013 | 71743.5 |
| 30s ribosomal protein s9 | DC415_17635 | Not Available | Negative | 3715105 - 3715572 | 16685.4 |
| 50s ribosomal protein l13 | DC415_17640 | Not Available | Negative | 3715575 - 3716039 | 17390.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


