Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nuclease | DC415_17445 | Not Available | Positive | 3681482 - 3682192 | 24634.8 |
| Trna-leu | Not Available | Not Available | Positive | 3682255 - 3682336 | Not Available |
| potassium transporter | DC415_17455 | Not Available | Negative | 3682342 - 3683745 | 50223.2 |
| threonine ammonia-lyase | DC415_17460 | Not Available | Positive | 3683917 - 3685167 | 45839.3 |
| transcriptional activator hlyu | DC415_17465 | Not Available | Positive | 3685233 - 3685541 | 11288.3 |
| fmn-dependent nadh-azoreductase | DC415_17470 | Not Available | Negative | 3685606 - 3686220 | 21540.7 |
| lysr family transcriptional regulator | DC415_17475 | Not Available | Positive | 3686356 - 3687312 | 34769.0 |
| bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase | DC415_17480 | Not Available | Negative | 3687394 - 3689385 | 71997.7 |
| duf1203 domain-containing protein | DC415_17485 | Not Available | Negative | 3689545 - 3690012 | 17002.2 |
| hypothetical protein | DC415_17490 | Not Available | Positive | 3690173 - 3691057 | 32639.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


