Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_17395 | Not Available | Negative | 3673866 - 3674366 | 18477.3 |
| hypothetical protein | DC415_17400 | Not Available | Negative | 3674363 - 3674914 | 20462.5 |
| branched-chain amino acid abc transporter permease | DC415_17405 | Not Available | Positive | 3674976 - 3675872 | 31531.8 |
| outer membrane protein assembly factor bame | DC415_17410 | Not Available | Negative | 3675951 - 3676481 | 18731.5 |
| ubiquinol-cytochrome c chaperone | DC415_17415 | Not Available | Positive | 3676756 - 3677295 | 19793.0 |
| metal-binding protein | DC415_17420 | Not Available | Positive | 3677304 - 3677867 | 20575.4 |
| phosphate acyltransferase plsx | DC415_17425 | Not Available | Positive | 3677967 - 3679028 | 37989.0 |
| ketoacyl-acp synthase iii | DC415_17430 | Not Available | Positive | 3679032 - 3680003 | 34152.9 |
| integration host factor subunit alpha | DC415_17435 | Not Available | Positive | 3680252 - 3680590 | 12454.1 |
| merr family transcriptional regulator | DC415_17440 | Not Available | Positive | 3680756 - 3681295 | 19994.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


