Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DC415_17340 | Not Available | Positive | 3662131 - 3663174 | 38907.3 |
| sn-glycerol-3-phosphate abc transporter atp-binding protein ugpc | DC415_17345 | Not Available | Positive | 3663197 - 3664279 | 38905.4 |
| dihydroxy-acid dehydratase | DC415_17350 | Not Available | Positive | 3664281 - 3666005 | 61999.6 |
| nad-dependent dehydratase | DC415_17355 | Not Available | Positive | 3666018 - 3666818 | 29487.2 |
| ribonuclease activity regulator rraa | DC415_17360 | Not Available | Positive | 3666852 - 3667562 | 25430.4 |
| galactose 1-dehydrogenase | DC415_17365 | Not Available | Negative | 3667715 - 3668641 | 33910.4 |
| glycosyl transferase family 1 | DC415_17375 | Not Available | Negative | 3669679 - 3671562 | 68460.8 |
| trans-aconitate methyltransferase | DC415_17380 | Not Available | Positive | 3671677 - 3672435 | 28379.3 |
| beta-aryl ether-cleaving protein | DC415_17385 | Not Available | Positive | 3672546 - 3673241 | 25746.7 |
| nucleoside-diphosphate kinase | DC415_17390 | Not Available | Positive | 3673344 - 3673766 | 15363.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


