Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter permease lptf | DC415_17290 | Not Available | Negative | 3651355 - 3652524 | 42875.6 |
| leucyl aminopeptidase | DC415_17295 | Not Available | Positive | 3652820 - 3654310 | 52200.8 |
| dna polymerase iii subunit chi | DC415_17300 | Not Available | Positive | 3654340 - 3654789 | 16739.6 |
| calcium-binding protein | DC415_17305 | Not Available | Negative | 3654802 - 3655728 | 33195.2 |
| gntr family transcriptional regulator | DC415_17310 | Not Available | Negative | 3655762 - 3656460 | 25711.7 |
| oxidoreductase | DC415_17315 | Not Available | Positive | 3656580 - 3657626 | 36825.7 |
| oxidoreductase | DC415_17320 | Not Available | Positive | 3657626 - 3658642 | 37423.5 |
| gfo/idh/moca family oxidoreductase | DC415_17325 | Not Available | Positive | 3658639 - 3659718 | 38395.8 |
| abc transporter substrate-binding protein | DC415_17330 | Not Available | Positive | 3659838 - 3661112 | 46140.6 |
| sugar abc transporter permease | DC415_17335 | Not Available | Positive | 3661170 - 3662138 | 35772.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


