Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| colicin v production protein | DC415_17135 | Not Available | Negative | 3620643 - 3621230 | 21105.8 |
| dna repair protein rada | DC415_17140 | Not Available | Negative | 3621324 - 3622727 | 49372.1 |
| alanine racemase | DC415_17145 | Not Available | Negative | 3622839 - 3624014 | 42265.8 |
| arac family transcriptional regulator | DC415_17150 | Not Available | Positive | 3624130 - 3624951 | 30495.2 |
| branched-chain amino acid abc transporter permease | DC415_17155 | Not Available | Positive | 3625026 - 3625736 | 25138.2 |
| hypothetical protein | DC415_17160 | Not Available | Positive | 3625733 - 3626035 | 10171.0 |
| replicative dna helicase | DC415_17165 | Not Available | Negative | 3626103 - 3627599 | 54821.2 |
| marr family transcriptional regulator | DC415_17170 | Not Available | Positive | 3627920 - 3628375 | 17329.9 |
| mfs transporter | DC415_17175 | Not Available | Positive | 3628477 - 3630078 | 57864.4 |
| hemolysin secretion protein d | DC415_17180 | Not Available | Positive | 3630097 - 3631164 | 37923.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


