Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan-associated lipoprotein pal | DC415_01395 | Not Available | Positive | 282952 - 283488 | 18906.4 |
| tol-pal system protein ybgf | DC415_01400 | Not Available | Positive | 283661 - 284662 | 34662.3 |
| trna lysidine(34) synthetase tils | DC415_01405 | Not Available | Positive | 284683 - 286011 | 47924.4 |
| atp-dependent metallopeptidase ftsh/yme1/tma family protein | DC415_01410 | Not Available | Positive | 286142 - 288088 | 70907.0 |
| phosphoglucosamine mutase | DC415_01415 | Not Available | Positive | 288524 - 289876 | 48515.5 |
| ggdef-domain containing protein | DC415_01420 | Not Available | Negative | 290248 - 292098 | 67861.3 |
| hypothetical protein | DC415_01425 | Not Available | Positive | 292704 - 293498 | 28312.4 |
| phosphoserine transaminase | DC415_01430 | Not Available | Positive | 293707 - 294885 | 42342.0 |
| phosphoglycerate dehydrogenase | DC415_01435 | Not Available | Positive | 294966 - 296561 | 56492.5 |
| hypothetical protein | DC415_01440 | Not Available | Positive | 296766 - 297842 | 37378.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


