Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | DC415_16935 | Not Available | Positive | 3581478 - 3582224 | 28206.7 |
| ribonuclease iii | DC415_16940 | Not Available | Positive | 3582221 - 3582940 | 26190.1 |
| gtpase era | DC415_16945 | Not Available | Positive | 3582951 - 3583910 | 35577.7 |
| nitrogen fixation protein | DC415_16950 | Not Available | Positive | 3584120 - 3584872 | 28104.1 |
| response regulator | DC415_16955 | Not Available | Positive | 3585192 - 3585545 | 12926.5 |
| dna repair protein reco | DC415_16960 | Not Available | Positive | 3585844 - 3586623 | 28147.8 |
| mfs transporter | DC415_16965 | Not Available | Negative | 3586642 - 3587874 | 43630.0 |
| sam-dependent methyltransferase | DC415_16970 | Not Available | Positive | 3588006 - 3588740 | 27641.8 |
| mosc domain-containing protein | DC415_16975 | Not Available | Negative | 3588737 - 3589582 | 30750.7 |
| phosphohydrolase | DC415_16980 | Not Available | Negative | 3589593 - 3590234 | 23454.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


