Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | DC415_16885 | Not Available | Positive | 3571202 - 3571708 | 18832.8 |
| ggdef-domain containing protein | DC415_16890 | Not Available | Positive | 3571718 - 3573652 | 71180.0 |
| fkbm family methyltransferase | DC415_16895 | Not Available | Positive | 3573725 - 3574420 | 25584.3 |
| globin-coupled sensor protein | DC415_16900 | Not Available | Negative | 3574501 - 3575991 | 53472.2 |
| nyn domain-containing protein | DC415_16905 | Not Available | Negative | 3576174 - 3576749 | 21738.0 |
| dna-directed rna polymerase subunit omega | DC415_16910 | Not Available | Positive | 3577030 - 3577422 | 14524.6 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DC415_16915 | Not Available | Positive | 3577569 - 3579803 | 84122.0 |
| duf3563 domain-containing protein | DC415_16920 | Not Available | Positive | 3579995 - 3580141 | 5657.86 |
| duf2062 domain-containing protein | DC415_16925 | Not Available | Positive | 3580360 - 3580938 | 21120.4 |
| holo-acp synthase | DC415_16930 | Not Available | Positive | 3580935 - 3581339 | 14867.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


