Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aspartate aminotransferase family protein | DC415_16735 | Not Available | Positive | 3540324 - 3541730 | 50856.6 |
| peroxiredoxin | DC415_16740 | Not Available | Positive | 3541733 - 3542203 | 17276.3 |
| glycosyltransferase | DC415_16745 | Not Available | Negative | 3542200 - 3543693 | 54706.8 |
| glycosyltransferase | DC415_16750 | Not Available | Negative | 3543698 - 3544708 | 37439.0 |
| hypothetical protein | DC415_16755 | Not Available | Positive | 3544845 - 3545747 | 32399.5 |
| amp nucleosidase | DC415_16760 | Not Available | Negative | 3545763 - 3547268 | 55467.0 |
| gnat family n-acetyltransferase | DC415_16765 | Not Available | Positive | 3547844 - 3548338 | 18267.9 |
| hypothetical protein | DC415_16770 | Not Available | Negative | 3548607 - 3548828 | 7949.62 |
| 30s ribosomal protein s21 | DC415_16775 | Not Available | Negative | 3548956 - 3549192 | 9348.69 |
| cold-shock protein | DC415_16780 | Not Available | Negative | 3549221 - 3549505 | 10343.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


