Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metallophosphoesterase | DC415_01345 | Not Available | Positive | 275302 - 276168 | 31147.3 |
| duf2945 domain-containing protein | DC415_01350 | Not Available | Positive | 276223 - 276441 | 8018.36 |
| damage-inducible protein dinb | DC415_01355 | Not Available | Positive | 276526 - 277092 | 21101.2 |
| dna mismatch repair protein mutt | DC415_01360 | Not Available | Positive | 277108 - 277620 | 19887.6 |
| dna mismatch repair protein mutt | DC415_01365 | Not Available | Positive | 277641 - 278141 | 19406.9 |
| tol-pal system-associated acyl-coa thioesterase | DC415_01370 | Not Available | Positive | 278134 - 278574 | 16549.2 |
| protein tolq | DC415_01375 | Not Available | Positive | 278840 - 279559 | 26021.7 |
| protein tolr | DC415_01380 | Not Available | Positive | 279594 - 280055 | 15752.1 |
| hypothetical protein | DC415_01385 | Not Available | Positive | 280064 - 281248 | 41696.8 |
| tol-pal system protein tolb | DC415_01390 | Not Available | Positive | 281327 - 282640 | 48402.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


