Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| eama family transporter | DC415_16585 | Not Available | Positive | 3508592 - 3509530 | 33717.4 |
| hypothetical protein | DC415_16590 | Not Available | Positive | 3509750 - 3510613 | 32503.9 |
| hypothetical protein | DC415_16595 | Not Available | Negative | 3510810 - 3510998 | 7021.29 |
| uracil-dna glycosylase | DC415_16600 | Not Available | Negative | 3511148 - 3512023 | 31286.3 |
| hsp70 family protein | DC415_16605 | Not Available | Negative | 3512179 - 3513471 | 47106.8 |
| lysr family transcriptional regulator | DC415_16610 | Not Available | Negative | 3513620 - 3514504 | 32500.3 |
| class d beta-lactamase | DC415_16615 | Not Available | Positive | 3514654 - 3515469 | 30378.2 |
| hypothetical protein | DC415_16620 | Not Available | Negative | 3515473 - 3515676 | 7273.38 |
| 3-oxoacyl-acp reductase | DC415_16625 | Not Available | Negative | 3515762 - 3516550 | 27348.2 |
| dgtpase | DC415_16630 | Not Available | Positive | 3516710 - 3518110 | 52409.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


