Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase nrfefg subunit nrfe | DC415_16535 | Not Available | Positive | 3491492 - 3493483 | 72300.5 |
| cytochrome c-type biogenesis protein ccmh | DC415_16540 | Not Available | Positive | 3493480 - 3493944 | 17099.9 |
| do family serine endopeptidase | DC415_16545 | Not Available | Positive | 3494101 - 3495651 | 53599.8 |
| dna-binding response regulator | DC415_16550 | Not Available | Positive | 3495857 - 3496639 | 29382.5 |
| two-component sensor histidine kinase | DC415_16555 | Not Available | Positive | 3496643 - 3498055 | 50979.4 |
| bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase | DC415_16560 | Not Available | Positive | 3498149 - 3501124 | 109309.0 |
| metallophosphoesterase | DC415_16565 | Not Available | Positive | 3501252 - 3502367 | 40114.3 |
| pas domain-containing sensor histidine kinase | DC415_16570 | Not Available | Negative | 3502413 - 3504809 | 88753.2 |
| carboxymuconolactone decarboxylase family protein | DC415_16575 | Not Available | Negative | 3504985 - 3505293 | 10545.7 |
| aminopeptidase n | DC415_16580 | Not Available | Negative | 3505414 - 3508062 | 98490.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


