Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycgn family cysteine cluster protein | DC415_16335 | Not Available | Positive | 3455118 - 3455597 | 17902.8 |
| class d beta-lactamase | DC415_16340 | Not Available | Positive | 3455841 - 3456656 | 30085.9 |
| sam-dependent methyltransferase | DC415_16345 | Not Available | Positive | 3456665 - 3457276 | 22605.1 |
| heavy metal translocating p-type atpase | DC415_16350 | Not Available | Positive | 3457524 - 3459992 | 86371.2 |
| cu(i)-responsive transcriptional regulator | DC415_16355 | Not Available | Positive | 3459989 - 3460417 | 15950.0 |
| copper chaperone | DC415_16360 | Not Available | Positive | 3460410 - 3460610 | 6896.11 |
| hypothetical protein | DC415_16365 | Not Available | Negative | 3460653 - 3460901 | 9267.11 |
| hypothetical protein | DC415_16370 | Not Available | Negative | 3460932 - 3461147 | 7747.54 |
| beta-fructofuranosidase | DC415_16375 | Not Available | Negative | 3461168 - 3462883 | 63581.0 |
| ydiu family protein | DC415_16380 | Not Available | Positive | 3463095 - 3464555 | 53994.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


