Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_16285 | Not Available | Negative | 3444984 - 3445901 | 33841.0 |
| hypothetical protein | DC415_16290 | Not Available | Positive | 3446535 - 3446741 | 7256.61 |
| duf1254 domain-containing protein | DC415_16295 | Not Available | Negative | 3446773 - 3447324 | 20115.2 |
| hypothetical protein | DC415_16300 | Not Available | Negative | 3447317 - 3447904 | 20343.3 |
| hypothetical protein | DC415_16305 | Not Available | Negative | 3448301 - 3448636 | 12350.5 |
| hypothetical protein | DC415_16310 | Not Available | Positive | 3448890 - 3449333 | 16107.8 |
| sorbosone dehydrogenase | DC415_16315 | Not Available | Negative | 3449387 - 3450886 | 52896.4 |
| hypothetical protein | DC415_16320 | Not Available | Negative | 3450889 - 3451320 | 15777.6 |
| mfs transporter | DC415_16325 | Not Available | Positive | 3451568 - 3452740 | 40526.2 |
| penicillin-binding protein | DC415_16330 | Not Available | Negative | 3452754 - 3454934 | 79414.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


