Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator | DC415_16235 | Not Available | Positive | 3435710 - 3435982 | 10085.2 |
| cation transporter | DC415_16240 | Not Available | Positive | 3435990 - 3437009 | 36889.0 |
| hypothetical protein | DC415_16245 | Not Available | Negative | 3437104 - 3437388 | 9714.04 |
| s9 family peptidase | DC415_16250 | Not Available | Negative | 3437670 - 3439769 | 77926.5 |
| duf930 domain-containing protein | DC415_16255 | Not Available | Positive | 3440003 - 3440404 | 15044.1 |
| cysteine desulfuration protein sufe | DC415_16260 | Not Available | Negative | 3440441 - 3440857 | 15178.0 |
| hypothetical protein | DC415_16265 | Not Available | Negative | 3441069 - 3441479 | 14484.2 |
| two-component sensor histidine kinase | DC415_16270 | Not Available | Positive | 3441967 - 3443487 | 54952.0 |
| peptidoglycan-binding protein | DC415_16275 | Not Available | Positive | 3443459 - 3444418 | 33663.2 |
| duf1491 domain-containing protein | DC415_16280 | Not Available | Positive | 3444618 - 3444959 | 12977.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


