Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid aminotransferase | DC415_16135 | Not Available | Positive | 3421717 - 3422601 | 32369.8 |
| transcriptional regulator argp | DC415_16140 | Not Available | Negative | 3422659 - 3423567 | 33370.2 |
| amino acid transporter | DC415_16145 | Not Available | Positive | 3423659 - 3424267 | 21401.6 |
| lysr family transcriptional regulator | DC415_16150 | Not Available | Negative | 3424254 - 3425126 | 31961.1 |
| gnat family n-acetyltransferase | DC415_16155 | Not Available | Positive | 3425230 - 3425772 | 19452.4 |
| hypothetical protein | DC415_16160 | Not Available | Negative | 3425836 - 3426174 | 11518.8 |
| superoxide dismutase | DC415_16165 | Not Available | Positive | 3426394 - 3426996 | 22629.5 |
| phosphatase | DC415_16170 | Not Available | Positive | 3427122 - 3427970 | 31565.2 |
| cytochrome c556 | DC415_16175 | Not Available | Positive | 3428283 - 3428687 | 13493.1 |
| diacylglycerol kinase | DC415_16180 | Not Available | Positive | 3428764 - 3429681 | 31995.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


