Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tigr00282 family metallophosphoesterase | DC415_01295 | Not Available | Positive | 267522 - 268346 | 29406.0 |
| zn-dependent hydrolase | DC415_01300 | Not Available | Positive | 268498 - 269328 | 30459.1 |
| general stress protein | DC415_01305 | Not Available | Negative | 269420 - 269923 | 18891.2 |
| yebc/pmpr family dna-binding transcriptional regulator | DC415_01310 | Not Available | Positive | 270129 - 270875 | 26701.2 |
| alkane 1-monooxygenase | DC415_01315 | Not Available | Negative | 271082 - 272083 | 36267.5 |
| crossover junction endodeoxyribonuclease ruvc | DC415_01320 | Not Available | Positive | 272295 - 272807 | 18115.1 |
| holliday junction branch migration protein ruva | DC415_01325 | Not Available | Positive | 272860 - 273477 | 21272.7 |
| abrb/maze/spovt family dna-binding domain-containing protein | DC415_01330 | Not Available | Positive | 273553 - 273834 | 9904.6 |
| pin domain-containing protein | DC415_01335 | Not Available | Positive | 273831 - 274235 | 15027.4 |
| holliday junction branch migration dna helicase ruvb | DC415_01340 | Not Available | Positive | 274232 - 275272 | 38142.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


