Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3750 domain-containing protein | DC415_15985 | Not Available | Negative | 3393342 - 3394040 | 24859.6 |
| asparaginase | DC415_15990 | Not Available | Positive | 3394196 - 3395203 | 35434.4 |
| glutathione s-transferase | DC415_15995 | Not Available | Negative | 3395262 - 3395921 | 24191.0 |
| hypothetical protein | DC415_16000 | Not Available | Positive | 3396224 - 3397711 | 54457.1 |
| marr family transcriptional regulator | DC415_16005 | Not Available | Negative | 3397748 - 3398254 | 18528.5 |
| mfs transporter | DC415_16010 | Not Available | Positive | 3398365 - 3399885 | 52877.1 |
| ggdef domain-containing protein | DC415_16015 | Not Available | Negative | 3399854 - 3400684 | 29698.1 |
| dna ligase-associated dexh box helicase | DC415_16020 | Not Available | Positive | 3400839 - 3401834 | 36538.8 |
| atp-dependent dna ligase | DC415_16025 | Not Available | Positive | 3401837 - 3403462 | 60815.4 |
| aminopeptidase | DC415_16030 | Not Available | Positive | 3403555 - 3404493 | 34551.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


