Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructose-bisphosphate aldolase class i | DC415_01245 | Not Available | Negative | 256353 - 257378 | 37035.3 |
| phosphoglycerate kinase | DC415_01250 | Not Available | Negative | 257645 - 258847 | 41886.4 |
| potassium/proton antiporter | DC415_01255 | Not Available | Negative | 258952 - 260769 | 65398.4 |
| type i glyceraldehyde-3-phosphate dehydrogenase | DC415_01260 | Not Available | Negative | 260963 - 261973 | 35799.9 |
| transketolase | DC415_01265 | Not Available | Negative | 262118 - 264100 | 71568.0 |
| duf4164 domain-containing protein | DC415_01270 | Not Available | Positive | 264489 - 264761 | 10351.3 |
| cell division protein zapa | DC415_01275 | Not Available | Positive | 264774 - 265151 | 13866.8 |
| Ncrna_class:other | Not Available | Not Available | Positive | 265231 - 265388 | Not Available |
| dna-binding protein | DC415_01285 | Not Available | Positive | 265652 - 266929 | 45891.3 |
| 5-formyltetrahydrofolate cyclo-ligase | DC415_01290 | Not Available | Positive | 266929 - 267525 | 21086.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


