Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | DC415_15580 | Not Available | Negative | 3313687 - 3314295 | 22839.4 |
| enoyl-[acyl-carrier-protein] reductase fabi | DC415_15585 | Not Available | Negative | 3314389 - 3315207 | 29196.9 |
| molecular chaperone dnaj | DC415_15590 | Not Available | Negative | 3315339 - 3316457 | 40315.7 |
| hypothetical protein | DC415_15595 | Not Available | Negative | 3316670 - 3317119 | 15737.5 |
| pyridoxamine 5'-phosphate oxidase | DC415_15600 | Not Available | Positive | 3317177 - 3317797 | 23744.9 |
| pyrophosphatase | DC415_15605 | Not Available | Positive | 3317966 - 3318277 | 11834.0 |
| had family hydrolase | DC415_15610 | Not Available | Negative | 3318274 - 3318948 | 24400.4 |
| voc family protein | DC415_15615 | Not Available | Negative | 3318958 - 3319395 | 16663.0 |
| hypothetical protein | DC415_15620 | Not Available | Negative | 3319422 - 3319652 | 8670.3 |
| metalloprotease tldd | DC415_15630 | Not Available | Negative | 3319949 - 3321364 | 49788.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


