Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | DC415_15480 | Not Available | Negative | 3291936 - 3292229 | 10532.8 |
| 50s ribosomal protein l4 | DC415_15485 | Not Available | Negative | 3292226 - 3292846 | 22250.2 |
| 50s ribosomal protein l3 | DC415_15490 | Not Available | Negative | 3292859 - 3293500 | 22570.0 |
| 30s ribosomal protein s10 | DC415_15495 | Not Available | Negative | 3293672 - 3293980 | 11557.1 |
| elongation factor tu | DC415_15500 | Not Available | Negative | 3294400 - 3295562 | 42183.6 |
| ice nucleation-like protein | DC415_15505 | Not Available | Positive | 3295563 - 3297779 | 72804.7 |
| glycosyl transferase | DC415_15510 | Not Available | Positive | 3298303 - 3300345 | 75870.4 |
| 1-deoxy-d-xylulose-5-phosphate synthase | DC415_15515 | Not Available | Negative | 3300419 - 3302338 | 68061.6 |
| hypothetical protein | DC415_15520 | Not Available | Negative | 3302531 - 3303454 | 33531.9 |
| exodeoxyribonuclease vii small subunit | DC415_15525 | Not Available | Negative | 3303631 - 3303885 | 9217.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


