Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s13 | DC415_15380 | Not Available | Negative | 3281234 - 3281602 | 13754.0 |
| adenylate kinase | DC415_15385 | Not Available | Negative | 3281827 - 3282441 | 21872.0 |
| preprotein translocase subunit secy | DC415_15390 | Not Available | Negative | 3282438 - 3283778 | 47803.5 |
| 50s ribosomal protein l15 | DC415_15395 | Not Available | Negative | 3284137 - 3284616 | 16529.1 |
| 50s ribosomal protein l30 | DC415_15400 | Not Available | Negative | 3284633 - 3284839 | 7762.53 |
| 30s ribosomal protein s5 | DC415_15405 | Not Available | Negative | 3284851 - 3285420 | 20515.6 |
| 50s ribosomal protein l18 | DC415_15410 | Not Available | Negative | 3285549 - 3285911 | 12714.3 |
| 50s ribosomal protein l6 | DC415_15415 | Not Available | Negative | 3285924 - 3286457 | 19482.6 |
| 30s ribosomal protein s8 | DC415_15420 | Not Available | Negative | 3286500 - 3286898 | 14424.4 |
| 30s ribosomal protein s14 | DC415_15425 | Not Available | Negative | 3286911 - 3287216 | 11353.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


