Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_15130 | Not Available | Negative | 3230796 - 3231314 | 18918.1 |
| nadp-dependent isocitrate dehydrogenase | DC415_15135 | Not Available | Positive | 3231541 - 3232755 | 45080.8 |
| glutathione s-transferase | DC415_15140 | Not Available | Positive | 3232986 - 3233609 | 23059.8 |
| bifunctional diguanylate cyclase/phosphodiesterase | DC415_15145 | Not Available | Positive | 3233846 - 3235963 | 76786.6 |
| lipoyl(octanoyl) transferase lipb | DC415_15150 | Not Available | Negative | 3236049 - 3236783 | 27024.3 |
| Trna-leu | Not Available | Not Available | Positive | 3236972 - 3237056 | Not Available |
| hypothetical protein | DC415_15160 | Not Available | Negative | 3237146 - 3237334 | 7215.46 |
| alanine--trna ligase | DC415_15165 | Not Available | Negative | 3237872 - 3240535 | 95684.4 |
| recombinase reca | DC415_15170 | Not Available | Negative | 3240741 - 3241829 | 38750.6 |
| carbohydrate kinase | DC415_15175 | Not Available | Positive | 3242075 - 3243013 | 32737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


