Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isoprenyl transferase | DC415_14980 | Not Available | Negative | 3199237 - 3199980 | 27545.9 |
| ribosome recycling factor | DC415_14985 | Not Available | Negative | 3200047 - 3200604 | 20519.6 |
| ump kinase | DC415_14990 | Not Available | Negative | 3200675 - 3201397 | 24884.2 |
| elongation factor ts | DC415_14995 | Not Available | Negative | 3201598 - 3202524 | 32213.8 |
| 30s ribosomal protein s2 | DC415_15000 | Not Available | Negative | 3202797 - 3203564 | 28241.8 |
| duf1849 domain-containing protein | DC415_15005 | Not Available | Negative | 3203755 - 3204594 | 30622.3 |
| hypothetical protein | DC415_15010 | Not Available | Positive | 3204712 - 3205182 | 16107.5 |
| glycerophosphodiester phosphodiesterase | DC415_15015 | Not Available | Positive | 3205200 - 3205922 | 26636.5 |
| gnat family n-acetyltransferase | DC415_15020 | Not Available | Positive | 3205919 - 3207109 | 44667.1 |
| hit family protein | DC415_15025 | Not Available | Positive | 3207131 - 3207550 | 15254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


