Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldo/keto reductase | DC415_14930 | Not Available | Negative | 3188166 - 3189203 | 37586.6 |
| lysr family transcriptional regulator | DC415_14935 | Not Available | Positive | 3189302 - 3190207 | 32930.6 |
| lipid-a-disaccharide synthase | DC415_14940 | Not Available | Negative | 3190262 - 3191434 | 43213.6 |
| duf1009 domain-containing protein | DC415_14945 | Not Available | Negative | 3191443 - 3192351 | 31374.4 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | DC415_14950 | Not Available | Negative | 3192314 - 3193126 | 28219.9 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase fabz | DC415_14955 | Not Available | Negative | 3193123 - 3193590 | 17158.9 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | DC415_14960 | Not Available | Negative | 3193583 - 3194647 | 36900.6 |
| outer membrane protein assembly factor bama | DC415_14965 | Not Available | Negative | 3194697 - 3197021 | 84291.3 |
| rip metalloprotease rsep | DC415_14970 | Not Available | Negative | 3197221 - 3198354 | 40503.4 |
| cdp-archaeol synthase | DC415_14975 | Not Available | Negative | 3198404 - 3199237 | 29102.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


