Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DC415_14880 | Not Available | Positive | 3174933 - 3175115 | 6969.54 |
| hypothetical protein | DC415_14885 | Not Available | Negative | 3175372 - 3175626 | 8689.76 |
| nad kinase | DC415_14890 | Not Available | Positive | 3176092 - 3176865 | 28434.9 |
| hypothetical protein | DC415_14895 | Not Available | Positive | 3176874 - 3177380 | 18117.6 |
| hydrolase | DC415_14900 | Not Available | Negative | 3177482 - 3177946 | 16854.3 |
| peptide chain release factor 2 | DC415_14905 | Not Available | Negative | 3178102 - 3179233 | 42361.3 |
| penicillin-binding protein | DC415_14910 | Not Available | Negative | 3179332 - 3181767 | 88146.2 |
| n-acetylmuramoyl-l-alanine amidase | DC415_14915 | Not Available | Negative | 3182073 - 3183341 | 45773.4 |
| ribonuclease e/g | DC415_14920 | Not Available | Positive | 3183993 - 3186932 | 108035.0 |
| agmatinase | DC415_14925 | Not Available | Positive | 3187145 - 3188056 | 32015.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


