Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase trpc | DC415_14830 | Not Available | Positive | 3163706 - 3164521 | 29469.4 |
| cyclic pyranopterin monophosphate synthase moac | DC415_14835 | Not Available | Positive | 3164518 - 3164997 | 16691.5 |
| molybdopterin molybdenumtransferase moea | DC415_14840 | Not Available | Positive | 3165073 - 3166290 | 42777.8 |
| dimethylglycine dehydrogenase | DC415_14845 | Not Available | Negative | 3166509 - 3169022 | 91996.7 |
| mechanosensitive ion channel protein | DC415_14850 | Not Available | Negative | 3169188 - 3171653 | 89092.2 |
| glsb/yeaq/ymge family stress response membrane protein | DC415_14855 | Not Available | Positive | 3171936 - 3172187 | 8543.04 |
| Trna-lys | Not Available | Not Available | Positive | 3172349 - 3172424 | Not Available |
| hypothetical protein | DC415_14865 | Not Available | Negative | 3172874 - 3173713 | 31583.6 |
| hypothetical protein | DC415_14870 | Not Available | Positive | 3174065 - 3174310 | 8950.14 |
| hypothetical protein | DC415_14875 | Not Available | Positive | 3174482 - 3174694 | 7618.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


