Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat shock protein hspq | DC415_14730 | Not Available | Positive | 3140688 - 3141017 | 12829.9 |
| invasion associated locus b family protein | DC415_14735 | Not Available | Negative | 3141099 - 3141746 | 22661.5 |
| abc transporter substrate-binding protein | DC415_14740 | Not Available | Positive | 3142065 - 3143891 | 68153.0 |
| dsba family protein | DC415_14745 | Not Available | Positive | 3144004 - 3144675 | 24858.7 |
| eama/rhat family transporter | DC415_14750 | Not Available | Positive | 3144752 - 3145696 | 33723.1 |
| hypothetical protein | DC415_14755 | Not Available | Negative | 3145789 - 3146109 | 11347.6 |
| transcription-repair coupling factor | DC415_14760 | Not Available | Negative | 3146248 - 3149757 | 128312.0 |
| succinate dehydrogenase assembly factor 2 family protein | DC415_14765 | Not Available | Negative | 3149761 - 3150072 | 11801.2 |
| atp-dependent dna helicase recg | DC415_14770 | Not Available | Positive | 3150263 - 3152368 | 76799.1 |
| hypothetical protein | DC415_14775 | Not Available | Positive | 3152376 - 3152642 | 9900.85 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


