Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zinc abc transporter substrate-binding protein | DC415_14680 | Not Available | Positive | 3127831 - 3128883 | 37711.1 |
| 4-hydroxytetrahydrobiopterin dehydratase | DC415_14685 | Not Available | Positive | 3128965 - 3130170 | 44476.8 |
| hypothetical protein | DC415_14690 | Not Available | Negative | 3130221 - 3130550 | 12917.8 |
| l-glyceraldehyde 3-phosphate reductase | DC415_14695 | Not Available | Negative | 3130742 - 3131776 | 38303.3 |
| beta-mannosidase | DC415_14700 | Not Available | Negative | 3131863 - 3134319 | 92101.2 |
| laci family transcriptional regulator | DC415_14705 | Not Available | Positive | 3134796 - 3135848 | 38603.2 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | DC415_14710 | Not Available | Negative | 3135857 - 3137371 | 52797.1 |
| nitrogen regulatory protein p-ii | DC415_14715 | Not Available | Positive | 3137721 - 3138059 | 12253.8 |
| type i glutamate--ammonia ligase | DC415_14720 | Not Available | Positive | 3138126 - 3139535 | 52103.2 |
| eama/rhat family transporter | DC415_14725 | Not Available | Positive | 3139696 - 3140613 | 32880.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


