Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| riboflavin deaminase | DC415_14530 | Not Available | Negative | 3098728 - 3099366 | 23401.1 |
| ctp synthase | DC415_14535 | Not Available | Negative | 3099445 - 3101082 | 60474.4 |
| preprotein translocase subunit secg | DC415_14540 | Not Available | Negative | 3101318 - 3101803 | 15812.8 |
| triose-phosphate isomerase | DC415_14545 | Not Available | Negative | 3101922 - 3102692 | 27195.5 |
| phospholipase | DC415_14550 | Not Available | Negative | 3102832 - 3103713 | 31434.7 |
| dna topoisomerase iv subunit b | DC415_14555 | Not Available | Positive | 3103897 - 3105972 | 76164.7 |
| hypothetical protein | DC415_14560 | Not Available | Negative | 3106019 - 3106324 | 11746.7 |
| lipoyl synthase | DC415_14565 | Not Available | Negative | 3106351 - 3107325 | 36631.0 |
| glsb/yeaq/ymge family stress response membrane protein | DC415_14570 | Not Available | Negative | 3107358 - 3107606 | 8894.37 |
| glsb/yeaq/ymge family stress response membrane protein | DC415_14575 | Not Available | Negative | 3107649 - 3107903 | 8391.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


