Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium tumefaciens |
| Strain | strain TPD7005 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 25 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Viridiplantae, Triticum aestivum, Solanum tuberosum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1073976 bp
Thymine Count
1086538 bp
Guanine Count
1515935 bp
Cytosine Count
1493195 bp
Genome Length
5169670 bp
Protein-coding Genes
4676 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligoendopeptidase f | DC415_01090 | Not Available | Negative | 226243 - 228093 | 68786.4 |
| sigma-54-dependent fis family transcriptional regulator | DC415_01095 | Not Available | Positive | 228264 - 229811 | 55172.1 |
| hypothetical protein | DC415_01100 | Not Available | Positive | 230127 - 231896 | 61761.9 |
| hypothetical protein | DC415_01105 | Not Available | Negative | 232008 - 232316 | 11149.5 |
| ice nucleation-like protein | DC415_01110 | Not Available | Positive | 232525 - 234759 | 73646.9 |
| damage-inducible protein dinb | DC415_01115 | Not Available | Negative | 234828 - 235334 | 19590.1 |
| tetr family transcriptional regulator | DC415_01120 | Not Available | Positive | 235435 - 236031 | 22232.5 |
| pyruvate kinase | DC415_01125 | Not Available | Negative | 236207 - 237646 | 51217.0 |
| hypothetical protein | DC415_01130 | Not Available | Negative | 237646 - 238128 | 17969.1 |
| amidohydrolase | DC415_01135 | Not Available | Positive | 238323 - 239111 | 29229.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Tumors | Causes | PMC177831 |
| Crown gall disease | Causes | PMC2241609 |
| Crown gall disease | Causes | PMC2653234 |
| Crown gall disease | Causes | PMC11575935 |
| Crown and cane gall symptoms | Causes | PMC12602688 |
| Crown and cane galls | Causes | PMC12602688 |
| Crown gall disease | Causes | PMC9343901 |
| Crown gall | Causes | PMC12030312 |
| Crown-gall disease | Causes | PMC7248198 |
| Crown gall tumors | Causes | PMC8087989 |


